1 Commits

Author SHA1 Message Date
0bbd3deccb added result, 21.3905 2026-01-24 21:02:44 +01:00
11 changed files with 157 additions and 86 deletions

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@@ -15,11 +15,9 @@ def init_weights(m):
nn.init.kaiming_normal_(m.weight, mode='fan_out', nonlinearity='relu') nn.init.kaiming_normal_(m.weight, mode='fan_out', nonlinearity='relu')
if m.bias is not None: if m.bias is not None:
nn.init.constant_(m.bias, 0) nn.init.constant_(m.bias, 0)
elif isinstance(m, (nn.BatchNorm2d, nn.InstanceNorm2d)): elif isinstance(m, nn.BatchNorm2d):
if m.weight is not None: nn.init.constant_(m.weight, 1)
nn.init.constant_(m.weight, 1) nn.init.constant_(m.bias, 0)
if m.bias is not None:
nn.init.constant_(m.bias, 0)
class ChannelAttention(nn.Module): class ChannelAttention(nn.Module):
@@ -71,36 +69,55 @@ class CBAM(nn.Module):
class ConvBlock(nn.Module): class ConvBlock(nn.Module):
"""Convolutional block with Conv2d -> InstanceNorm2d -> GELU""" """Convolutional block with Conv2d -> BatchNorm -> LeakyReLU"""
def __init__(self, in_channels, out_channels, kernel_size=3, padding=1, dropout=0.0, dilation=1): def __init__(self, in_channels, out_channels, kernel_size=3, padding=1, dropout=0.0):
super().__init__() super().__init__()
self.conv = nn.Conv2d(in_channels, out_channels, kernel_size, padding=padding, dilation=dilation) self.conv = nn.Conv2d(in_channels, out_channels, kernel_size, padding=padding)
# InstanceNorm is preferred for style/inpainting tasks self.bn = nn.BatchNorm2d(out_channels)
self.bn = nn.InstanceNorm2d(out_channels, affine=True) self.relu = nn.LeakyReLU(0.1, inplace=True)
self.act = nn.GELU()
self.dropout = nn.Dropout2d(dropout) if dropout > 0 else nn.Identity() self.dropout = nn.Dropout2d(dropout) if dropout > 0 else nn.Identity()
def forward(self, x): def forward(self, x):
return self.dropout(self.act(self.bn(self.conv(x)))) return self.dropout(self.relu(self.bn(self.conv(x))))
class ResidualConvBlock(nn.Module): class ResidualConvBlock(nn.Module):
"""Residual convolutional block for better gradient flow""" """Residual convolutional block for better gradient flow"""
def __init__(self, channels, dropout=0.0, dilation=1): def __init__(self, channels, dropout=0.0):
super().__init__() super().__init__()
self.conv1 = nn.Conv2d(channels, channels, 3, padding=dilation, dilation=dilation) self.conv1 = nn.Conv2d(channels, channels, 3, padding=1)
self.bn1 = nn.InstanceNorm2d(channels, affine=True) self.bn1 = nn.BatchNorm2d(channels)
self.conv2 = nn.Conv2d(channels, channels, 3, padding=dilation, dilation=dilation) self.conv2 = nn.Conv2d(channels, channels, 3, padding=1)
self.bn2 = nn.InstanceNorm2d(channels, affine=True) self.bn2 = nn.BatchNorm2d(channels)
self.act = nn.GELU() self.relu = nn.LeakyReLU(0.1, inplace=True)
self.dropout = nn.Dropout2d(dropout) if dropout > 0 else nn.Identity() self.dropout = nn.Dropout2d(dropout) if dropout > 0 else nn.Identity()
def forward(self, x): def forward(self, x):
residual = x residual = x
out = self.act(self.bn1(self.conv1(x))) out = self.relu(self.bn1(self.conv1(x)))
out = self.dropout(out) out = self.dropout(out)
out = self.bn2(self.conv2(out)) out = self.bn2(self.conv2(out))
out = out + residual out = out + residual
return self.act(out) return self.relu(out)
class DilatedResidualBlock(nn.Module):
"""Residual block with dilated convolutions for larger receptive field"""
def __init__(self, channels, dilation=2, dropout=0.0):
super().__init__()
self.conv1 = nn.Conv2d(channels, channels, 3, padding=dilation, dilation=dilation)
self.bn1 = nn.BatchNorm2d(channels)
self.conv2 = nn.Conv2d(channels, channels, 3, padding=dilation, dilation=dilation)
self.bn2 = nn.BatchNorm2d(channels)
self.relu = nn.LeakyReLU(0.1, inplace=True)
self.dropout = nn.Dropout2d(dropout) if dropout > 0 else nn.Identity()
def forward(self, x):
residual = x
out = self.relu(self.bn1(self.conv1(x)))
out = self.dropout(out)
out = self.bn2(self.conv2(out))
out = out + residual
return self.relu(out)
class DownBlock(nn.Module): class DownBlock(nn.Module):
@@ -161,12 +178,13 @@ class MyModel(nn.Module):
self.down3 = DownBlock(base_channels * 4, base_channels * 8, dropout=dropout) self.down3 = DownBlock(base_channels * 4, base_channels * 8, dropout=dropout)
self.down4 = DownBlock(base_channels * 8, base_channels * 16, dropout=dropout) self.down4 = DownBlock(base_channels * 8, base_channels * 16, dropout=dropout)
# Bottleneck with multiple residual blocks # Bottleneck with multi-scale dilated convolutions (ASPP-style)
self.bottleneck = nn.Sequential( self.bottleneck = nn.Sequential(
ConvBlock(base_channels * 16, base_channels * 16, dropout=dropout), ConvBlock(base_channels * 16, base_channels * 16, dropout=dropout),
ResidualConvBlock(base_channels * 16, dropout=dropout, dilation=2), ResidualConvBlock(base_channels * 16, dropout=dropout),
ResidualConvBlock(base_channels * 16, dropout=dropout, dilation=4), DilatedResidualBlock(base_channels * 16, dilation=2, dropout=dropout),
ResidualConvBlock(base_channels * 16, dropout=dropout, dilation=8), DilatedResidualBlock(base_channels * 16, dilation=4, dropout=dropout),
ResidualConvBlock(base_channels * 16, dropout=dropout),
CBAM(base_channels * 16) CBAM(base_channels * 16)
) )
@@ -186,7 +204,7 @@ class MyModel(nn.Module):
# Output layer with smooth transition # Output layer with smooth transition
self.output = nn.Sequential( self.output = nn.Sequential(
nn.Conv2d(base_channels, base_channels // 2, kernel_size=3, padding=1), nn.Conv2d(base_channels, base_channels // 2, kernel_size=3, padding=1),
nn.GELU(), nn.LeakyReLU(0.1, inplace=True),
nn.Conv2d(base_channels // 2, 3, kernel_size=1), nn.Conv2d(base_channels // 2, 3, kernel_size=1),
nn.Sigmoid() # Ensure output is in [0, 1] range nn.Sigmoid() # Ensure output is in [0, 1] range
) )

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@@ -10,7 +10,7 @@ import numpy as np
import random import random
import glob import glob
import os import os
from PIL import Image from PIL import Image, ImageEnhance
IMAGE_DIMENSION = 100 IMAGE_DIMENSION = 100
@@ -26,21 +26,11 @@ def create_arrays_from_image(image_array: np.ndarray, offset: tuple, spacing: tu
return image_array, known_array return image_array, known_array
def resize(img: Image, augment: bool = False): def resize(img: Image):
transforms_list = [ resize_transforms = transforms.Compose([
transforms.Resize((IMAGE_DIMENSION, IMAGE_DIMENSION)), transforms.Resize((IMAGE_DIMENSION, IMAGE_DIMENSION)),
transforms.CenterCrop((IMAGE_DIMENSION, IMAGE_DIMENSION)) transforms.CenterCrop((IMAGE_DIMENSION, IMAGE_DIMENSION))
] ])
if augment:
transforms_list = [
transforms.RandomHorizontalFlip(),
transforms.RandomVerticalFlip(),
transforms.ColorJitter(brightness=0.1, contrast=0.1, saturation=0.1, hue=0.05),
transforms.RandomRotation(10),
] + transforms_list
resize_transforms = transforms.Compose(transforms_list)
return resize_transforms(img) return resize_transforms(img)
def preprocess(input_array: np.ndarray): def preprocess(input_array: np.ndarray):
input_array = np.asarray(input_array, dtype=np.float32) / 255.0 input_array = np.asarray(input_array, dtype=np.float32) / 255.0
@@ -48,26 +38,69 @@ def preprocess(input_array: np.ndarray):
class ImageDataset(torch.utils.data.Dataset): class ImageDataset(torch.utils.data.Dataset):
""" """
Dataset class for loading images from a folder Dataset class for loading images from a folder with data augmentation
""" """
def __init__(self, datafolder: str, augment: bool = False): def __init__(self, datafolder: str, augment: bool = True):
self.imagefiles = sorted(glob.glob(os.path.join(datafolder,"**","*.jpg"),recursive=True)) self.imagefiles = sorted(glob.glob(os.path.join(datafolder,"**","*.jpg"),recursive=True))
self.augment = augment self.augment = augment
def __len__(self): def __len__(self):
return len(self.imagefiles) return len(self.imagefiles)
def augment_image(self, image: Image) -> Image:
"""Apply random augmentations to image"""
# Random horizontal flip
if random.random() > 0.5:
image = image.transpose(Image.FLIP_LEFT_RIGHT)
# Random vertical flip
if random.random() > 0.5:
image = image.transpose(Image.FLIP_TOP_BOTTOM)
# Random rotation (90, 180, 270 degrees)
if random.random() > 0.5:
angle = random.choice([90, 180, 270])
image = image.rotate(angle)
# Random brightness adjustment
if random.random() > 0.5:
enhancer = ImageEnhance.Brightness(image)
factor = random.uniform(0.8, 1.2)
image = enhancer.enhance(factor)
# Random contrast adjustment
if random.random() > 0.5:
enhancer = ImageEnhance.Contrast(image)
factor = random.uniform(0.8, 1.2)
image = enhancer.enhance(factor)
# Random color adjustment
if random.random() > 0.5:
enhancer = ImageEnhance.Color(image)
factor = random.uniform(0.8, 1.2)
image = enhancer.enhance(factor)
return image
def __getitem__(self, idx:int): def __getitem__(self, idx:int):
index = int(idx) index = int(idx)
image = Image.open(self.imagefiles[index]) image = Image.open(self.imagefiles[index])
image = np.asarray(resize(image, self.augment)) image = resize(image)
# Apply augmentation if enabled
if self.augment:
image = self.augment_image(image)
image = np.asarray(image)
image = preprocess(image) image = preprocess(image)
spacing_x = random.randint(2,6)
spacing_y = random.randint(2,6) # Vary spacing and offset more for additional diversity
offset_x = random.randint(0,8) spacing_x = random.randint(2,7)
offset_y = random.randint(0,8) spacing_y = random.randint(2,7)
offset_x = random.randint(0,10)
offset_y = random.randint(0,10)
spacing = (spacing_x, spacing_y) spacing = (spacing_x, spacing_y)
offset = (offset_x, offset_y) offset = (offset_x, offset_y)
input_array, known_array = create_arrays_from_image(image.copy(), offset, spacing) input_array, known_array = create_arrays_from_image(image.copy(), offset, spacing)

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@@ -24,22 +24,22 @@ if __name__ == '__main__':
config_dict['results_path'] = os.path.join(project_root, "results") config_dict['results_path'] = os.path.join(project_root, "results")
config_dict['data_path'] = os.path.join(project_root, "data", "dataset") config_dict['data_path'] = os.path.join(project_root, "data", "dataset")
config_dict['device'] = None config_dict['device'] = None
config_dict['learningrate'] = 3e-4 # Optimal learning rate for AdamW config_dict['learningrate'] = 2e-4 # Slightly lower for more stable training
config_dict['weight_decay'] = 1e-4 # Slightly higher for better regularization config_dict['weight_decay'] = 5e-5 # Reduced for less aggressive regularization
config_dict['n_updates'] = 5000 # More updates for better convergence config_dict['n_updates'] = 8000 # More updates for better convergence
config_dict['batchsize'] = 8 # Smaller batch for better gradient estimates config_dict['batchsize'] = 12 # Larger batch for more stable gradients
config_dict['early_stopping_patience'] = 10 # More patience for complex model config_dict['early_stopping_patience'] = 15 # More patience for complex model
config_dict['use_wandb'] = False config_dict['use_wandb'] = False
config_dict['print_train_stats_at'] = 10 config_dict['print_train_stats_at'] = 10
config_dict['print_stats_at'] = 100 config_dict['print_stats_at'] = 100
config_dict['plot_at'] = 300 config_dict['plot_at'] = 400
config_dict['validate_at'] = 300 # Validate more frequently config_dict['validate_at'] = 200 # Validate frequently but not too often
network_config = { network_config = {
'n_in_channels': 4, 'n_in_channels': 4,
'base_channels': 48, # Good balance between capacity and memory 'base_channels': 32, # Smaller base for efficiency, depth compensates
'dropout': 0.1 # Regularization 'dropout': 0.15 # Slightly more regularization with augmentation
} }
config_dict['network_config'] = network_config config_dict['network_config'] = network_config

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@@ -21,8 +21,8 @@ import wandb
class CombinedLoss(nn.Module): class CombinedLoss(nn.Module):
"""Combined loss: MSE + L1 + SSIM-like perceptual component""" """Combined loss: MSE + L1 + Edge-aware component for better reconstruction"""
def __init__(self, mse_weight=1.0, l1_weight=0.5, edge_weight=0.1): def __init__(self, mse_weight=0.7, l1_weight=0.8, edge_weight=0.2):
super().__init__() super().__init__()
self.mse_weight = mse_weight self.mse_weight = mse_weight
self.l1_weight = l1_weight self.l1_weight = l1_weight
@@ -84,25 +84,24 @@ def train(seed, testset_ratio, validset_ratio, data_path, results_path, early_st
plotpath = os.path.join(results_path, "plots") plotpath = os.path.join(results_path, "plots")
os.makedirs(plotpath, exist_ok=True) os.makedirs(plotpath, exist_ok=True)
image_dataset = datasets.ImageDataset(datafolder=data_path, augment=False) # Create dataset with augmentation for training, without for validation/test
image_dataset_full = datasets.ImageDataset(datafolder=data_path, augment=False)
n_total = len(image_dataset) n_total = len(image_dataset_full)
n_test = int(n_total * testset_ratio) n_test = int(n_total * testset_ratio)
n_valid = int(n_total * validset_ratio) n_valid = int(n_total * validset_ratio)
n_train = n_total - n_test - n_valid n_train = n_total - n_test - n_valid
indices = np.random.permutation(n_total) indices = np.random.permutation(n_total)
# Create datasets with and without augmentation # Create augmented dataset for training
train_dataset_source = datasets.ImageDataset(datafolder=data_path, augment=True) image_dataset_train = datasets.ImageDataset(datafolder=data_path, augment=True)
val_test_dataset_source = datasets.ImageDataset(datafolder=data_path, augment=False) dataset_train = Subset(image_dataset_train, indices=indices[0:n_train])
dataset_valid = Subset(image_dataset_full, indices=indices[n_train:n_train + n_valid])
dataset_test = Subset(image_dataset_full, indices=indices[n_train + n_valid:n_total])
dataset_train = Subset(train_dataset_source, indices=indices[0:n_train]) assert n_total == len(dataset_train) + len(dataset_test) + len(dataset_valid)
dataset_valid = Subset(val_test_dataset_source, indices=indices[n_train:n_train + n_valid])
dataset_test = Subset(val_test_dataset_source, indices=indices[n_train + n_valid:n_total])
assert len(image_dataset) == len(dataset_train) + len(dataset_test) + len(dataset_valid) del image_dataset_full, image_dataset_train
del image_dataset
dataloader_train = DataLoader(dataset=dataset_train, batch_size=batchsize, dataloader_train = DataLoader(dataset=dataset_train, batch_size=batchsize,
num_workers=0, shuffle=True) num_workers=0, shuffle=True)
@@ -116,15 +115,19 @@ def train(seed, testset_ratio, validset_ratio, data_path, results_path, early_st
network.to(device) network.to(device)
network.train() network.train()
# defining the loss - combined loss for better reconstruction # defining the loss - combined loss with optimized weights
combined_loss = CombinedLoss(mse_weight=1.0, l1_weight=0.5, edge_weight=0.1).to(device) combined_loss = CombinedLoss(mse_weight=0.7, l1_weight=0.8, edge_weight=0.2).to(device)
mse_loss = torch.nn.MSELoss() # Keep for evaluation mse_loss = torch.nn.MSELoss() # Keep for evaluation
# defining the optimizer with AdamW for better weight decay handling # defining the optimizer with AdamW for better weight decay handling
optimizer = torch.optim.AdamW(network.parameters(), lr=learningrate, weight_decay=weight_decay) optimizer = torch.optim.AdamW(network.parameters(), lr=learningrate, weight_decay=weight_decay)
# Learning rate scheduler for better convergence # Learning rate scheduler with better configuration
scheduler = CosineAnnealingWarmRestarts(optimizer, T_0=50, T_mult=2, eta_min=1e-6) scheduler = CosineAnnealingWarmRestarts(optimizer, T_0=100, T_mult=2, eta_min=1e-7)
# Mixed precision training for faster computation and lower memory usage
scaler = torch.cuda.amp.GradScaler() if device.type == 'cuda' else None
use_amp = scaler is not None
if use_wandb: if use_wandb:
wandb.watch(network, mse_loss, log="all", log_freq=10) wandb.watch(network, mse_loss, log="all", log_freq=10)
@@ -133,10 +136,13 @@ def train(seed, testset_ratio, validset_ratio, data_path, results_path, early_st
counter = 0 counter = 0
best_validation_loss = np.inf best_validation_loss = np.inf
loss_list = [] loss_list = []
accumulation_steps = 2 # Gradient accumulation for effective larger batch size
saved_model_path = os.path.join(results_path, "best_model.pt") saved_model_path = os.path.join(results_path, "best_model.pt")
print(f"Started training on device {device}") print(f"Started training on device {device}")
print(f"Using mixed precision: {use_amp}")
print(f"Gradient accumulation steps: {accumulation_steps}")
while i < n_updates: while i < n_updates:
@@ -147,21 +153,33 @@ def train(seed, testset_ratio, validset_ratio, data_path, results_path, early_st
if (i + 1) % print_train_stats_at == 0: if (i + 1) % print_train_stats_at == 0:
print(f'Update Step {i + 1} of {n_updates}: Current loss: {loss_list[-1]}') print(f'Update Step {i + 1} of {n_updates}: Current loss: {loss_list[-1]}')
optimizer.zero_grad() # Use mixed precision if available
if use_amp:
with torch.cuda.amp.autocast():
output = network(input)
loss = combined_loss(output, target)
loss = loss / accumulation_steps
scaler.scale(loss).backward()
else:
output = network(input)
loss = combined_loss(output, target)
loss = loss / accumulation_steps
loss.backward()
output = network(input) # Gradient accumulation - update weights every accumulation_steps
if (i + 1) % accumulation_steps == 0:
if use_amp:
scaler.unscale_(optimizer)
torch.nn.utils.clip_grad_norm_(network.parameters(), max_norm=1.0)
scaler.step(optimizer)
scaler.update()
else:
torch.nn.utils.clip_grad_norm_(network.parameters(), max_norm=1.0)
optimizer.step()
optimizer.zero_grad()
scheduler.step(i / n_updates)
loss = combined_loss(output, target) loss_list.append(loss.item() * accumulation_steps)
loss.backward()
# Gradient clipping for training stability
torch.nn.utils.clip_grad_norm_(network.parameters(), max_norm=1.0)
optimizer.step()
scheduler.step(i + len(loss_list) / len(dataloader_train))
loss_list.append(loss.item())
# writing the stats to wandb # writing the stats to wandb
if use_wandb and (i+1) % print_stats_at == 0: if use_wandb and (i+1) % print_stats_at == 0:
@@ -170,7 +188,9 @@ def train(seed, testset_ratio, validset_ratio, data_path, results_path, early_st
# plotting # plotting
if (i + 1) % plot_at == 0: if (i + 1) % plot_at == 0:
print(f"Plotting images, current update {i + 1}") print(f"Plotting images, current update {i + 1}")
plot(input.cpu().numpy(), target.detach().cpu().numpy(), output.detach().cpu().numpy(), plotpath, i) # Convert to float32 for matplotlib compatibility (mixed precision may produce float16)
plot(input.float().cpu().numpy(), target.detach().float().cpu().numpy(),
output.detach().float().cpu().numpy(), plotpath, i)
# evaluating model every validate_at sample # evaluating model every validate_at sample
if (i + 1) % validate_at == 0: if (i + 1) % validate_at == 0: